Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00585 | GMDG_02681 | L8G773 | L8G4R3 | AB hydrolase-1 domain-containing protein. | Tryptophan synthase. | 0.863 |
GMDG_00585 | GMDG_05210 | L8G773 | L8FNL1 | AB hydrolase-1 domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.569 |
GMDG_00585 | GMDG_06733 | L8G773 | L8FV48 | AB hydrolase-1 domain-containing protein. | Uncharacterized protein. | 0.744 |
GMDG_00585 | GMDG_07683 | L8G773 | L8FY26 | AB hydrolase-1 domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.593 |
GMDG_00585 | GMDG_08197 | L8G773 | L8G2Q6 | AB hydrolase-1 domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.871 |
GMDG_02537 | GMDG_05111 | L8G2P5 | L8FN88 | AAA_23 domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.988 |
GMDG_02537 | GMDG_05210 | L8G2P5 | L8FNL1 | AAA_23 domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.999 |
GMDG_02537 | GMDG_06733 | L8G2P5 | L8FV48 | AAA_23 domain-containing protein. | Uncharacterized protein. | 0.629 |
GMDG_02537 | GMDG_08197 | L8G2P5 | L8G2Q6 | AAA_23 domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.652 |
GMDG_02681 | GMDG_00585 | L8G4R3 | L8G773 | Tryptophan synthase. | AB hydrolase-1 domain-containing protein. | 0.863 |
GMDG_02681 | GMDG_06733 | L8G4R3 | L8FV48 | Tryptophan synthase. | Uncharacterized protein. | 0.741 |
GMDG_02681 | GMDG_07683 | L8G4R3 | L8FY26 | Tryptophan synthase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.805 |
GMDG_05111 | GMDG_02537 | L8FN88 | L8G2P5 | 3'-5' exonuclease domain-containing protein. | AAA_23 domain-containing protein. | 0.988 |
GMDG_05111 | GMDG_05210 | L8FN88 | L8FNL1 | 3'-5' exonuclease domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.995 |
GMDG_05111 | GMDG_06733 | L8FN88 | L8FV48 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.658 |
GMDG_05111 | GMDG_08197 | L8FN88 | L8G2Q6 | 3'-5' exonuclease domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.979 |
GMDG_05210 | GMDG_00585 | L8FNL1 | L8G773 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | AB hydrolase-1 domain-containing protein. | 0.569 |
GMDG_05210 | GMDG_02537 | L8FNL1 | L8G2P5 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | AAA_23 domain-containing protein. | 0.999 |
GMDG_05210 | GMDG_05111 | L8FNL1 | L8FN88 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 3'-5' exonuclease domain-containing protein. | 0.995 |
GMDG_05210 | GMDG_06733 | L8FNL1 | L8FV48 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein. | 0.630 |
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