STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMDG_02155RING-type domain-containing protein. (517 aa)    
Predicted Functional Partners:
GMDG_06763
Ubiquitin-like domain-containing protein.
    
 0.800
GMDG_03391
Polyubiquitin.
    
 0.787
GMDG_08108
P/Homo B domain-containing protein.
    
  0.757
GMDG_01346
Ubiquitin-40S ribosomal protein S27a.
    
  0.699
GMDG_02083
BZIP domain-containing protein.
    
  0.699
GMDG_03916
BZIP domain-containing protein.
    
  0.699
GMDG_05335
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.668
GMDG_05350
Uncharacterized protein.
    
 0.661
GMDG_06613
Uncharacterized protein.
    
 0.661
GMDG_01835
HECT domain-containing protein.
     
 0.661
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.