Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00458 | GMDG_01464 | L8G3W4 | L8FV79 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | MaoC-like domain-containing protein. | 0.469 |
GMDG_00458 | GMDG_05086 | L8G3W4 | L8FMY6 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.732 |
GMDG_00458 | GMDG_06377 | L8G3W4 | L8FSA2 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family. | 0.875 |
GMDG_00458 | GMDG_06639 | L8G3W4 | L8FWZ3 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.661 |
GMDG_00458 | GMDG_07456 | L8G3W4 | L8G0R5 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.728 |
GMDG_00458 | GMDG_07775 | L8G3W4 | L8FZY1 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.957 |
GMDG_00458 | GMDG_09045 | L8G3W4 | L8FU13 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.864 |
GMDG_01464 | GMDG_00458 | L8FV79 | L8G3W4 | MaoC-like domain-containing protein. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.469 |
GMDG_01464 | GMDG_02730 | L8FV79 | L8G4X8 | MaoC-like domain-containing protein. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.912 |
GMDG_01464 | GMDG_04070 | L8FV79 | L8GC06 | MaoC-like domain-containing protein. | Uncharacterized protein. | 0.676 |
GMDG_01464 | GMDG_05086 | L8FV79 | L8FMY6 | MaoC-like domain-containing protein. | Uncharacterized protein. | 0.547 |
GMDG_01464 | GMDG_06377 | L8FV79 | L8FSA2 | MaoC-like domain-containing protein. | Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family. | 0.966 |
GMDG_01464 | GMDG_06639 | L8FV79 | L8FWZ3 | MaoC-like domain-containing protein. | Uncharacterized protein. | 0.881 |
GMDG_01464 | GMDG_07456 | L8FV79 | L8G0R5 | MaoC-like domain-containing protein. | Uncharacterized protein. | 0.854 |
GMDG_01464 | GMDG_07775 | L8FV79 | L8FZY1 | MaoC-like domain-containing protein. | Uncharacterized protein. | 0.913 |
GMDG_01464 | GMDG_09045 | L8FV79 | L8FU13 | MaoC-like domain-containing protein. | Uncharacterized protein. | 0.903 |
GMDG_01478 | GMDG_02730 | L8FU35 | L8G4X8 | WD_REPEATS_REGION domain-containing protein. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.429 |
GMDG_01478 | GMDG_07456 | L8FU35 | L8G0R5 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.474 |
GMDG_01478 | GMDG_07775 | L8FU35 | L8FZY1 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.922 |
GMDG_02730 | GMDG_01464 | L8G4X8 | L8FV79 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | MaoC-like domain-containing protein. | 0.912 |
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