Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_01280 | GMDG_02024 | L8FSI6 | L8G0D2 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.968 |
GMDG_01280 | GMDG_02657 | L8FSI6 | L8G499 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | 40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. | 0.999 |
GMDG_01280 | GMDG_02684 | L8FSI6 | L8G6Q6 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
GMDG_01280 | GMDG_02694 | L8FSI6 | L8G3H6 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | Bms1-type G domain-containing protein. | 0.997 |
GMDG_01280 | GMDG_04942 | L8FSI6 | L8GEU5 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.918 |
GMDG_01280 | GMDG_05126 | L8FSI6 | L8FNA7 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.614 |
GMDG_01280 | GMDG_05826 | L8FSI6 | L8FQZ4 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.999 |
GMDG_01280 | GMDG_06265 | L8FSI6 | L8FRL8 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.997 |
GMDG_01280 | GMDG_08147 | L8FSI6 | L8G4E6 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | 40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. | 0.999 |
GMDG_01280 | GMDG_08383 | L8FSI6 | L8G3X1 | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.999 |
GMDG_02024 | GMDG_01280 | L8G0D2 | L8FSI6 | Uncharacterized protein. | Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family. | 0.968 |
GMDG_02024 | GMDG_02657 | L8G0D2 | L8G499 | Uncharacterized protein. | 40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. | 0.966 |
GMDG_02024 | GMDG_02684 | L8G0D2 | L8G6Q6 | Uncharacterized protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.966 |
GMDG_02024 | GMDG_02694 | L8G0D2 | L8G3H6 | Uncharacterized protein. | Bms1-type G domain-containing protein. | 0.986 |
GMDG_02024 | GMDG_04942 | L8G0D2 | L8GEU5 | Uncharacterized protein. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.973 |
GMDG_02024 | GMDG_05126 | L8G0D2 | L8FNA7 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
GMDG_02024 | GMDG_05826 | L8G0D2 | L8FQZ4 | Uncharacterized protein. | Uncharacterized protein. | 0.990 |
GMDG_02024 | GMDG_06265 | L8G0D2 | L8FRL8 | Uncharacterized protein. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.976 |
GMDG_02024 | GMDG_08147 | L8G0D2 | L8G4E6 | Uncharacterized protein. | 40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. | 0.967 |
GMDG_02024 | GMDG_08383 | L8G0D2 | L8G3X1 | Uncharacterized protein. | Uncharacterized protein. | 0.986 |
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