Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00128 | GMDG_00384 | L8FLE3 | L8G700 | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.557 |
GMDG_00128 | GMDG_02573 | L8FLE3 | L8G679 | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized protein. | 0.781 |
GMDG_00128 | GMDG_08839 | L8FLE3 | L8FP68 | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized protein. | 0.557 |
GMDG_00384 | GMDG_00128 | L8G700 | L8FLE3 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.557 |
GMDG_00384 | GMDG_02199 | L8G700 | L8G468 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.556 |
GMDG_00384 | GMDG_02573 | L8G700 | L8G679 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Uncharacterized protein. | 0.714 |
GMDG_00384 | GMDG_05464 | L8G700 | L8FRR2 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Uncharacterized protein. | 0.457 |
GMDG_00384 | GMDG_08426 | L8G700 | L8G2U4 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 2OG-FeII_Oxy_2 domain-containing protein. | 0.557 |
GMDG_00705 | GMDG_02573 | L8GA48 | L8G679 | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized protein. | 0.755 |
GMDG_00705 | GMDG_07881 | L8GA48 | L8G2M8 | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized protein. | 0.822 |
GMDG_01357 | GMDG_02573 | L8FTL6 | L8G679 | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized protein. | 0.700 |
GMDG_01357 | GMDG_07881 | L8FTL6 | L8G2M8 | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized protein. | 0.743 |
GMDG_02199 | GMDG_00384 | L8G468 | L8G700 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.556 |
GMDG_02199 | GMDG_02573 | L8G468 | L8G679 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Uncharacterized protein. | 0.772 |
GMDG_02199 | GMDG_05464 | L8G468 | L8FRR2 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Uncharacterized protein. | 0.934 |
GMDG_02199 | GMDG_08839 | L8G468 | L8FP68 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Uncharacterized protein. | 0.556 |
GMDG_02573 | GMDG_00128 | L8G679 | L8FLE3 | Uncharacterized protein. | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.781 |
GMDG_02573 | GMDG_00384 | L8G679 | L8G700 | Uncharacterized protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.714 |
GMDG_02573 | GMDG_00705 | L8G679 | L8GA48 | Uncharacterized protein. | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.755 |
GMDG_02573 | GMDG_01357 | L8G679 | L8FTL6 | Uncharacterized protein. | Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.700 |
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