STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMDG_03547Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
GMDG_09045
Uncharacterized protein.
   
 0.813
GMDG_02730
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.750
GMDG_04815
ER membrane protein SH3.
  
 
 0.750
GMDG_06377
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.747
GMDG_08442
Uncharacterized protein.
     
 0.706
GMDG_02818
Uncharacterized protein.
     
 0.706
GMDG_08055
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.688
GMDG_04861
TPR_REGION domain-containing protein.
     
 0.684
GMDG_01987
Flavokinase domain-containing protein.
   
 
  0.682
GMDG_05153
Pex2_Pex12 domain-containing protein.
    
 0.669
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.