Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_03822 | GMDG_04676 | L8G835 | L8GB37 | HTH CENPB-type domain-containing protein. | Uncharacterized protein. | 0.459 |
GMDG_03822 | GMDG_04999 | L8G835 | L8GEY9 | HTH CENPB-type domain-containing protein. | Uncharacterized protein. | 0.459 |
GMDG_03822 | GMDG_06711 | L8G835 | L8FUW0 | HTH CENPB-type domain-containing protein. | Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. | 0.610 |
GMDG_03822 | GMDG_07653 | L8G835 | L8FXZ7 | HTH CENPB-type domain-containing protein. | Transcription elongation factor S-II. | 0.483 |
GMDG_03822 | GMDG_08637 | L8G835 | L8G8Q2 | HTH CENPB-type domain-containing protein. | Uncharacterized protein. | 0.459 |
GMDG_04676 | GMDG_03822 | L8GB37 | L8G835 | Uncharacterized protein. | HTH CENPB-type domain-containing protein. | 0.459 |
GMDG_04676 | GMDG_07653 | L8GB37 | L8FXZ7 | Uncharacterized protein. | Transcription elongation factor S-II. | 0.778 |
GMDG_04999 | GMDG_03822 | L8GEY9 | L8G835 | Uncharacterized protein. | HTH CENPB-type domain-containing protein. | 0.459 |
GMDG_04999 | GMDG_07653 | L8GEY9 | L8FXZ7 | Uncharacterized protein. | Transcription elongation factor S-II. | 0.778 |
GMDG_06711 | GMDG_03822 | L8FUW0 | L8G835 | Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. | HTH CENPB-type domain-containing protein. | 0.610 |
GMDG_07653 | GMDG_03822 | L8FXZ7 | L8G835 | Transcription elongation factor S-II. | HTH CENPB-type domain-containing protein. | 0.483 |
GMDG_07653 | GMDG_04676 | L8FXZ7 | L8GB37 | Transcription elongation factor S-II. | Uncharacterized protein. | 0.778 |
GMDG_07653 | GMDG_04999 | L8FXZ7 | L8GEY9 | Transcription elongation factor S-II. | Uncharacterized protein. | 0.778 |
GMDG_07653 | GMDG_08637 | L8FXZ7 | L8G8Q2 | Transcription elongation factor S-II. | Uncharacterized protein. | 0.771 |
GMDG_08637 | GMDG_03822 | L8G8Q2 | L8G835 | Uncharacterized protein. | HTH CENPB-type domain-containing protein. | 0.459 |
GMDG_08637 | GMDG_07653 | L8G8Q2 | L8FXZ7 | Uncharacterized protein. | Transcription elongation factor S-II. | 0.771 |