Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GMDG_00785 | GMDG_02132 | L8GBB2 | L8G350 | PfkB domain-containing protein. | Uncharacterized protein. | 0.531 |
| GMDG_00785 | GMDG_02133 | L8GBB2 | L8FZW9 | PfkB domain-containing protein. | Uncharacterized protein. | 0.531 |
| GMDG_00785 | GMDG_03525 | L8GBB2 | L8G9Y5 | PfkB domain-containing protein. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.631 |
| GMDG_00785 | GMDG_03549 | L8GBB2 | L8G7M3 | PfkB domain-containing protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.467 |
| GMDG_00785 | GMDG_05280 | L8GBB2 | L8FR29 | PfkB domain-containing protein. | Uncharacterized protein. | 0.531 |
| GMDG_02132 | GMDG_00785 | L8G350 | L8GBB2 | Uncharacterized protein. | PfkB domain-containing protein. | 0.531 |
| GMDG_02132 | GMDG_02258 | L8G350 | L8G2H6 | Uncharacterized protein. | TMP-TENI domain-containing protein. | 0.974 |
| GMDG_02132 | GMDG_03072 | L8G350 | L8G8C5 | Uncharacterized protein. | NMT1 domain-containing protein. | 0.834 |
| GMDG_02132 | GMDG_03285 | L8G350 | L8G6Z9 | Uncharacterized protein. | PfkB domain-containing protein. | 0.531 |
| GMDG_02132 | GMDG_03525 | L8G350 | L8G9Y5 | Uncharacterized protein. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.744 |
| GMDG_02132 | GMDG_03549 | L8G350 | L8G7M3 | Uncharacterized protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.531 |
| GMDG_02132 | GMDG_08364 | L8G350 | L8G3V1 | Uncharacterized protein. | Riboflavin biosynthesis protein RibD domain-containing protein. | 0.531 |
| GMDG_02132 | GMDG_08994 | L8G350 | L8FTB6 | Uncharacterized protein. | PfkB domain-containing protein. | 0.531 |
| GMDG_02133 | GMDG_00785 | L8FZW9 | L8GBB2 | Uncharacterized protein. | PfkB domain-containing protein. | 0.531 |
| GMDG_02133 | GMDG_03285 | L8FZW9 | L8G6Z9 | Uncharacterized protein. | PfkB domain-containing protein. | 0.531 |
| GMDG_02133 | GMDG_03525 | L8FZW9 | L8G9Y5 | Uncharacterized protein. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.700 |
| GMDG_02133 | GMDG_03549 | L8FZW9 | L8G7M3 | Uncharacterized protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.531 |
| GMDG_02133 | GMDG_08364 | L8FZW9 | L8G3V1 | Uncharacterized protein. | Riboflavin biosynthesis protein RibD domain-containing protein. | 0.531 |
| GMDG_02133 | GMDG_08994 | L8FZW9 | L8FTB6 | Uncharacterized protein. | PfkB domain-containing protein. | 0.531 |
| GMDG_02258 | GMDG_02132 | L8G2H6 | L8G350 | TMP-TENI domain-containing protein. | Uncharacterized protein. | 0.974 |
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