Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_02681 | GMDG_02859 | L8G4R3 | L8G7M7 | Tryptophan synthase. | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.625 |
GMDG_02681 | GMDG_03763 | L8G4R3 | L8GAZ4 | Tryptophan synthase. | Sulfite reductase hemoprotein beta-component. | 0.534 |
GMDG_02681 | GMDG_03887 | L8G4R3 | L8G8X2 | Tryptophan synthase. | NAD(P)-bd_dom domain-containing protein. | 0.539 |
GMDG_02681 | GMDG_04518 | L8G4R3 | L8GAN6 | Tryptophan synthase. | Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. | 0.609 |
GMDG_02681 | GMDG_04601 | L8G4R3 | L8GC23 | Tryptophan synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.999 |
GMDG_02681 | GMDG_05553 | L8G4R3 | L8FNY2 | Tryptophan synthase. | SPX domain-containing protein. | 0.862 |
GMDG_02859 | GMDG_02681 | L8G7M7 | L8G4R3 | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | Tryptophan synthase. | 0.625 |
GMDG_02859 | GMDG_03763 | L8G7M7 | L8GAZ4 | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | Sulfite reductase hemoprotein beta-component. | 0.992 |
GMDG_02859 | GMDG_03887 | L8G7M7 | L8G8X2 | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | NAD(P)-bd_dom domain-containing protein. | 0.537 |
GMDG_02859 | GMDG_04518 | L8G7M7 | L8GAN6 | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. | 0.536 |
GMDG_02859 | GMDG_04601 | L8G7M7 | L8GC23 | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.539 |
GMDG_03053 | GMDG_03054 | L8G553 | L8G6F3 | Uncharacterized protein. | GP-PDE domain-containing protein. | 0.983 |
GMDG_03053 | GMDG_03351 | L8G553 | L8G600 | Uncharacterized protein. | Uncharacterized protein. | 0.950 |
GMDG_03053 | GMDG_03887 | L8G553 | L8G8X2 | Uncharacterized protein. | NAD(P)-bd_dom domain-containing protein. | 0.583 |
GMDG_03053 | GMDG_04518 | L8G553 | L8GAN6 | Uncharacterized protein. | Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. | 0.543 |
GMDG_03053 | GMDG_04601 | L8G553 | L8GC23 | Uncharacterized protein. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.507 |
GMDG_03053 | GMDG_05553 | L8G553 | L8FNY2 | Uncharacterized protein. | SPX domain-containing protein. | 0.617 |
GMDG_03053 | GMDG_06071 | L8G553 | L8FRX9 | Uncharacterized protein. | Uncharacterized protein. | 0.933 |
GMDG_03054 | GMDG_03053 | L8G6F3 | L8G553 | GP-PDE domain-containing protein. | Uncharacterized protein. | 0.983 |
GMDG_03054 | GMDG_03351 | L8G6F3 | L8G600 | GP-PDE domain-containing protein. | Uncharacterized protein. | 0.950 |
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