Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00068 | GMDG_00921 | L8FL87 | L8FQ30 | Zn(2)-C6 fungal-type domain-containing protein. | Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. | 0.432 |
GMDG_00068 | GMDG_04750 | L8FL87 | L8GC71 | Zn(2)-C6 fungal-type domain-containing protein. | Uncharacterized protein. | 0.493 |
GMDG_00068 | GMDG_07522 | L8FL87 | L8FYR1 | Zn(2)-C6 fungal-type domain-containing protein. | TLDc domain-containing protein. | 0.432 |
GMDG_00068 | GMDG_07656 | L8FL87 | L8FZH4 | Zn(2)-C6 fungal-type domain-containing protein. | Uncharacterized protein. | 0.432 |
GMDG_00068 | GMDG_08074 | L8FL87 | L8G3U9 | Zn(2)-C6 fungal-type domain-containing protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.948 |
GMDG_00153 | GMDG_02916 | L8FWI4 | L8G5L1 | Choline-sulfatase. | BUD22 domain-containing protein. | 0.662 |
GMDG_00153 | GMDG_02941 | L8FWI4 | L8G5N1 | Choline-sulfatase. | Uncharacterized protein. | 0.753 |
GMDG_00153 | GMDG_04750 | L8FWI4 | L8GC71 | Choline-sulfatase. | Uncharacterized protein. | 0.552 |
GMDG_00153 | GMDG_06509 | L8FWI4 | L8FTW8 | Choline-sulfatase. | Uncharacterized protein. | 0.643 |
GMDG_00921 | GMDG_00068 | L8FQ30 | L8FL87 | Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. | Zn(2)-C6 fungal-type domain-containing protein. | 0.432 |
GMDG_00921 | GMDG_04750 | L8FQ30 | L8GC71 | Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. | Uncharacterized protein. | 0.493 |
GMDG_00921 | GMDG_08074 | L8FQ30 | L8G3U9 | Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.998 |
GMDG_02916 | GMDG_00153 | L8G5L1 | L8FWI4 | BUD22 domain-containing protein. | Choline-sulfatase. | 0.662 |
GMDG_02916 | GMDG_04750 | L8G5L1 | L8GC71 | BUD22 domain-containing protein. | Uncharacterized protein. | 0.566 |
GMDG_02916 | GMDG_06509 | L8G5L1 | L8FTW8 | BUD22 domain-containing protein. | Uncharacterized protein. | 0.645 |
GMDG_02941 | GMDG_00153 | L8G5N1 | L8FWI4 | Uncharacterized protein. | Choline-sulfatase. | 0.753 |
GMDG_02941 | GMDG_04750 | L8G5N1 | L8GC71 | Uncharacterized protein. | Uncharacterized protein. | 0.629 |
GMDG_02941 | GMDG_06509 | L8G5N1 | L8FTW8 | Uncharacterized protein. | Uncharacterized protein. | 0.645 |
GMDG_03887 | GMDG_04750 | L8G8X2 | L8GC71 | NAD(P)-bd_dom domain-containing protein. | Uncharacterized protein. | 0.925 |
GMDG_04750 | GMDG_00068 | L8GC71 | L8FL87 | Uncharacterized protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.493 |
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