Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00460 | GMDG_01007 | L8G4T0 | L8FNU0 | Uncharacterized protein. | Uncharacterized protein. | 0.687 |
GMDG_00460 | GMDG_01841 | L8G4T0 | L8FZ52 | Uncharacterized protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.534 |
GMDG_00460 | GMDG_03852 | L8G4T0 | L8G8U3 | Uncharacterized protein. | DHR10 domain-containing protein. | 0.999 |
GMDG_00460 | GMDG_04259 | L8G4T0 | L8G959 | Uncharacterized protein. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.692 |
GMDG_00460 | GMDG_05014 | L8G4T0 | L8GD30 | Uncharacterized protein. | TOG domain-containing protein. | 0.969 |
GMDG_00460 | GMDG_05678 | L8G4T0 | L8FPB5 | Uncharacterized protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.534 |
GMDG_00460 | GMDG_07724 | L8G4T0 | L8FZW2 | Uncharacterized protein. | HORMA domain-containing protein. | 0.966 |
GMDG_00902 | GMDG_01007 | L8FLJ0 | L8FNU0 | SGNH_hydro domain-containing protein. | Uncharacterized protein. | 0.799 |
GMDG_00902 | GMDG_01841 | L8FLJ0 | L8FZ52 | SGNH_hydro domain-containing protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.820 |
GMDG_00902 | GMDG_04259 | L8FLJ0 | L8G959 | SGNH_hydro domain-containing protein. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.799 |
GMDG_00902 | GMDG_05014 | L8FLJ0 | L8GD30 | SGNH_hydro domain-containing protein. | TOG domain-containing protein. | 0.920 |
GMDG_00902 | GMDG_05678 | L8FLJ0 | L8FPB5 | SGNH_hydro domain-containing protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.820 |
GMDG_00902 | GMDG_07724 | L8FLJ0 | L8FZW2 | SGNH_hydro domain-containing protein. | HORMA domain-containing protein. | 0.880 |
GMDG_01007 | GMDG_00460 | L8FNU0 | L8G4T0 | Uncharacterized protein. | Uncharacterized protein. | 0.687 |
GMDG_01007 | GMDG_00902 | L8FNU0 | L8FLJ0 | Uncharacterized protein. | SGNH_hydro domain-containing protein. | 0.799 |
GMDG_01007 | GMDG_01841 | L8FNU0 | L8FZ52 | Uncharacterized protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.982 |
GMDG_01007 | GMDG_03852 | L8FNU0 | L8G8U3 | Uncharacterized protein. | DHR10 domain-containing protein. | 0.641 |
GMDG_01007 | GMDG_05014 | L8FNU0 | L8GD30 | Uncharacterized protein. | TOG domain-containing protein. | 0.916 |
GMDG_01007 | GMDG_05678 | L8FNU0 | L8FPB5 | Uncharacterized protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.982 |
GMDG_01007 | GMDG_07724 | L8FNU0 | L8FZW2 | Uncharacterized protein. | HORMA domain-containing protein. | 0.882 |
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