STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR05098.1Hypothetical protein; COG3789. (132 aa)    
Predicted Functional Partners:
AJR05097.1
Hypothetical protein; COG1842.
 
  
 0.993
AJR05095.1
Hypothetical protein; COG1879.
 
     0.931
AJR05096.1
Putative potassium channel related protein; COG1226.
 
     0.926
AJR05093.1
Hypothetical protein; COG5463.
 
     0.910
AJR05094.1
Hypothetical protein; COG3766.
 
     0.906
AJR09322.1
Putative phage shock protein A; COG1842.
 
  
 0.867
AJR08743.1
Hypothetical protein.
  
  
 0.849
AJR08295.1
Hypothetical protein.
  
     0.730
AJR06744.1
Hypothetical protein; COG0754.
 
     0.684
AJR08716.1
Hypothetical protein; COG0841.
  
     0.649
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.