STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR05203.1Putative peroxiredoxin/glutaredoxin family protein; COG0678,COG0695. (243 aa)    
Predicted Functional Partners:
AJR05365.1
Putative glutathione peroxidase; COG0386; Belongs to the glutathione peroxidase family.
  
 0.957
AJR08821.1
Putative ABC transporter; COG0386; Belongs to the glutathione peroxidase family.
  
 0.957
AJR07113.1
Glutathione reductase; COG1249.
 
 0.948
AJR09739.1
Ahp/CTSA family anti-oxidant protein; COG0450.
  
 0.934
gshB-2
Glutathione synthetase; COG0189; Belongs to the prokaryotic GSH synthase family.
 
  
 0.933
gshB
Glutathione synthetase; COG0189; Belongs to the prokaryotic GSH synthase family.
 
  
 0.931
AJR08030.1
Glutathione S-transferase; COG0625.
  
 0.928
AJR05266.1
Glutathione S-transferase; COG0625.
  
 0.927
AJR07266.1
Putative peroxiredoxin/glutaredoxin family protein; COG0678,COG0695.
  
 
0.926
AJR06970.1
Putative gamma-glutamyltranspeptidase; COG0405.
  
  
 0.918
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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