STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR05229.1Sulfatase; COG3119. (532 aa)    
Predicted Functional Partners:
AJR05228.1
Putative periplasmic beta-glucosidase; COG1472.
       0.540
AJR05230.1
Putative methyl-accepting chemotaxis sensory transducer; COG0840.
       0.505
AJR05624.1
Hypothetical protein.
  
     0.484
AJR08456.1
Putative arylsulfatase regulator; COG0641.
 
   0.484
AJR05966.1
Putative arylsulfatase-activating protein aslB; COG0641.
 
   0.482
AJR05241.1
Putative arylsulfatase-activating protein aslB; COG0641.
 
   0.481
AJR06467.1
Arylsulfatase regulator (Fe-S oxidoreductase); COG0641.
 
   0.475
AJR09079.1
Putative arylsulfatase-activating protein aslB; COG0641.
 
   0.473
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.472
glgC-2
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.472
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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