STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR05441.1ATPase, E1-E2 type; COG0474. (902 aa)    
Predicted Functional Partners:
AJR06846.1
Hypothetical protein; COG1285.
  
 
 0.725
cysJ
Putative sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family.
    
 0.713
AJR06973.1
Hypothetical protein; COG3220; Belongs to the UPF0276 family.
   
    0.660
AJR05443.1
Hypothetical protein.
       0.642
AJR06437.1
Putative calcium-binding EF-hand-containing protein.
   
 
 0.635
AJR06972.1
Putative signal peptide protein; COG5572.
   
    0.600
AJR07758.1
Phosphate acetyltransferase; COG0280,COG0857.
  
  
 0.517
AJR05440.1
Hypothetical protein.
       0.497
AJR06621.1
Putative amino acid adenylation domain protein; COG1020,COG3320.
  
 
 0.497
AJR06623.1
Putative amino acid adenylation domain-containing protein; COG1020.
  
 
 0.497
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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