STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR05493.1Hypothetical protein; COG0510. (273 aa)    
Predicted Functional Partners:
AJR05494.1
Putative DegT/DnrJ/EryC1/StrS aminotransferase; COG0399; Belongs to the DegT/DnrJ/EryC1 family.
       0.773
AJR05798.1
Lipase-related protein; COG0596.
  
     0.663
AJR06748.1
Transcriptional regulator, TetR family; COG1309.
  
     0.562
AJR05488.1
Putative HAD family hydrolase; COG1011.
 
     0.540
AJR05495.1
Hypothetical protein; COG2120.
       0.526
AJR06728.1
Transcriptional regulator, TetR family; COG1309.
  
     0.516
AJR05353.1
Hypothetical protein.
  
     0.483
AJR05496.1
Hypothetical protein.
       0.478
AJR07758.1
Phosphate acetyltransferase; COG0280,COG0857.
   
    0.473
AJR08919.1
Hypothetical protein; COG0637.
  
     0.452
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.