Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJR05639.1 | AJR05640.1 | H744_1c0614 | H744_1c0615 | Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family. | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.594 |
AJR05640.1 | AJR05639.1 | H744_1c0615 | H744_1c0614 | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family. | 0.594 |
AJR05640.1 | AJR06621.1 | H744_1c0615 | H744_1c1603 | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Putative amino acid adenylation domain protein; COG1020,COG3320. | 0.423 |
AJR05640.1 | AJR06623.1 | H744_1c0615 | H744_1c1605 | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Putative amino acid adenylation domain-containing protein; COG1020. | 0.423 |
AJR05640.1 | AJR08190.1 | H744_1c0615 | H744_2c1512 | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Transport protein; COG0477. | 0.501 |
AJR06621.1 | AJR05640.1 | H744_1c1603 | H744_1c0615 | Putative amino acid adenylation domain protein; COG1020,COG3320. | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.423 |
AJR06621.1 | AJR06623.1 | H744_1c1603 | H744_1c1605 | Putative amino acid adenylation domain protein; COG1020,COG3320. | Putative amino acid adenylation domain-containing protein; COG1020. | 0.999 |
AJR06623.1 | AJR05640.1 | H744_1c1605 | H744_1c0615 | Putative amino acid adenylation domain-containing protein; COG1020. | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.423 |
AJR06623.1 | AJR06621.1 | H744_1c1605 | H744_1c1603 | Putative amino acid adenylation domain-containing protein; COG1020. | Putative amino acid adenylation domain protein; COG1020,COG3320. | 0.999 |
AJR08190.1 | AJR05640.1 | H744_2c1512 | H744_1c0615 | Transport protein; COG0477. | Putative permease; COG0477; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.501 |