STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR05754.1Putative DNA-binding response regulator; COG0745. (228 aa)    
Predicted Functional Partners:
AJR05753.1
Sensor histidine kinase; COG0642.
 
 
 0.966
AJR09889.1
Aerobic respiration control sensor protein ArcB; COG0642,COG0784,COG2198.
 
 
 0.934
AJR08883.1
Putative ATP-binding region, ATPase-like protein; COG0642,COG0784,COG2202.
 
 0.898
AJR07543.1
Hybrid sensory histidine kinase BarA; COG0642,COG0784.
  
 
 0.886
AJR09910.1
Sensory box sensor histidine kinase/response regulator; COG0642,COG0784.
  
 
0.860
AJR05123.1
Putative BaeS, Signal transduction histidine kinase; COG0642,COG0784,COG2198.
 
 
 0.763
AJR06559.1
Putative integral membrane sensor signal transduction histidine kinase; COG0642.
 
 
 0.697
AJR05586.1
Putative histidine kinase; COG0642,COG0784,COG2202.
 
 
 0.689
AJR08337.1
Putative hybrid two component sensor histidine kinase; COG0642,COG0784,COG2198.
 
 
 0.689
AJR09187.1
Putative sensor protein TorS; COG0642,COG0784,COG2198.
 
 
 0.686
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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