STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR06220.1Putative transposase; COG3436. (526 aa)    
Predicted Functional Partners:
AJR06221.1
Putative IS66 Orf2 family protein; COG3436.
 
     0.885
AJR05509.1
IS66 Orf2 family protein; COG3436.
 
     0.786
AJR05506.1
Putative transposase IS66; COG3436.
  
     0.774
AJR05508.1
Putative Transposase IS66; COG3436.
  
     0.774
AJR06454.1
Putative IS66 Orf2 family protein; COG3436.
  
     0.774
AJR08803.1
Putative IS66 Orf2 family protein; COG3436.
  
     0.774
AJR06222.1
Hypothetical protein; COG1330.
       0.515
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.