STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR06239.1Chitinase; COG3325,COG3979. (782 aa)    
Predicted Functional Partners:
AJR05091.1
Chitinase; COG3469,COG3979; Belongs to the glycosyl hydrolase 18 family.
 0.992
AJR08472.1
Putative chitinase; COG3469,COG3979.
 0.988
AJR05473.1
Glycosyl hydrolase family chitinase; COG3325,COG3979.
 
  
0.948
AJR09920.1
N,N'-diacetylchitobiose phosphorylase; COG3459.
  
 
  0.920
AJR09919.1
N-acetyl-beta-hexosaminidase; COG3525.
 
  
 0.914
nagK
N-acetyl-D-glucosamine kinase; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.
     
 0.903
AJR06630.1
beta-N-acetylhexosaminidase; COG3525.
 
  
 0.902
AJR07918.1
Putative beta-N-acetylhexosaminidase; COG3525.
 
  
 0.885
AJR06398.1
N-acetyl-beta-hexosaminidase; COG3525.
 
  
 0.871
AJR05291.1
Cytochrome c oxidase subunit II; COG1622,COG2857.
   
 
 0.859
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.