STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR06538.1Sucrose operon repressor ScrR; COG1609. (329 aa)    
Predicted Functional Partners:
AJR09476.1
Putative LacI family transcription regulator; COG1609.
  
     0.774
AJR09892.1
Putative glutamate synthase, large subunit; COG0067,COG0069,COG0070.
    
 
 0.771
AJR09894.1
Glutamate synthase subunit alpha; COG0067,COG0069,COG0070.
    
 
 0.771
AJR05099.1
Phosphoenolpyruvate-protein phosphotransferase; COG1080,COG1762,COG1925.
   
 
 0.766
AJR05617.1
Putative phosphoenolpyruvate-protein phosphotransferase; COG1080,COG1762,COG1925.
   
 
 0.766
AJR06621.1
Putative amino acid adenylation domain protein; COG1020,COG3320.
    
 
 0.766
AJR06623.1
Putative amino acid adenylation domain-containing protein; COG1020.
    
 
 0.766
AJR06622.1
Putative amino acid adenylation domain protein; COG1020,COG3320; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 
 0.757
AJR06539.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.661
AJR06543.1
PfkB domain protein; COG0524; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.414
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.