STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR06793.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
AJR06956.1
Hypothetical protein.
  
     0.720
AJR07923.1
Hypothetical protein.
  
     0.631
AJR09424.1
Hypothetical protein; COG0705.
  
     0.607
AJR08057.1
Putative extracellular lipase.
  
     0.586
AJR09966.1
Hypothetical protein.
  
     0.586
AJR06792.1
Hypothetical protein.
       0.566
AJR06794.1
Putative phage shock protein G.
       0.541
AJR07643.1
Putative outer membrane protein OmpH; Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm.
    
 
 0.536
AJR08029.1
Hypothetical protein; COG3139.
  
     0.506
AJR08186.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.