STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR07006.1DNA-binding transcriptional regulator IlvY; COG0583; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
AJR05835.1
Putative transcriptional regulator, LysR family; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.747
ilvC
Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
 
     0.747
AJR07139.1
LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.747
AJR05381.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.745
AJR06672.1
Putative LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.745
AJR08722.1
Transcriptional regulator, putative; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.715
AJR05434.1
Putative transcriptional regulator protein; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.705
AJR07007.1
Putative adenosylhomocysteinase; COG0499.
       0.705
AJR06498.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.681
AJR08419.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.661
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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