STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR07139.1LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family. (279 aa)    
Predicted Functional Partners:
AJR05835.1
Putative transcriptional regulator, LysR family; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.772
AJR08407.1
Hypothetical protein; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.771
AJR06672.1
Putative LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.770
AJR08477.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.768
AJR06675.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.765
AJR05148.1
LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.762
AJR07362.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.759
AJR08293.1
LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.759
AJR06591.1
Putative LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.755
AJR05434.1
Putative transcriptional regulator protein; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.753
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.