STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR07471.1ABC-type transporter; COG0842. (256 aa)    
Predicted Functional Partners:
AJR07470.1
ABC transporter ATP-binding protein; COG1131.
  
 0.977
AJR05987.1
Hypothetical protein; COG1266.
  
  
 0.577
AJR05550.1
ABC-type multidrug transport system, ATPase component; COG0842,COG1131.
  
  
 0.569
AJR08856.1
ABC transporter ATP-binding protein; COG1131.
  
  
 0.562
AJR07469.1
Putative carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.554
AJR08034.1
Putative nitroreductase; COG0778.
  
  
 0.546
AJR07821.1
Hypothetical protein; COG1944.
  
  
 0.540
AJR08510.1
Hypothetical protein; COG1944.
  
  
 0.540
AJR05686.1
Hypothetical protein.
  
  
 0.504
AJR05797.1
Nitroreductase; COG0778.
  
  
 0.504
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.