STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
glsAGlutaminase; COG2066; Belongs to the glutaminase family. (306 aa)    
Predicted Functional Partners:
AJR09892.1
Putative glutamate synthase, large subunit; COG0067,COG0069,COG0070.
     
 0.941
AJR09894.1
Glutamate synthase subunit alpha; COG0067,COG0069,COG0070.
     
 0.941
AJR06625.1
Putative pyridoxal-dependent decarboxylase; COG0076.
  
 
 0.929
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.925
AJR06265.1
Hypothetical protein; COG0174; Belongs to the glutamine synthetase family.
    
 0.924
AJR06951.1
Glutamine synthetase; COG0174.
    
 0.924
AJR05815.1
Glutamate dehydrogenase; COG0334; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.920
AJR06690.1
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.913
AJR09170.1
Putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; COG0493,COG1142.
     
 0.908
glmS
D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.906
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.