STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR07585.1Cell autolysis regulator LytS; COG3275. (568 aa)    
Predicted Functional Partners:
AJR07584.1
Putative two-component response-regulatory protein YehT; COG3279.
 
 
 0.988
AJR08499.1
Signal transduction histidine kinase regulating citrate/malate metabolism; COG3290.
  
   
 0.652
AJR07583.1
Putative carbon starvation protein A; COG1966.
 
   
 0.611
AJR09399.1
Putative sensor kinase citA; COG3290.
  
   
 0.575
AJR07586.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.547
AJR07587.1
Bifunctional chorismate mutase/prephenate dehydrogenase; COG0287,COG1605.
       0.517
AJR05461.1
Signal transduction histidine kinase regulating citrate/malate metabolism; COG3290.
  
   
 0.469
AJR08498.1
Response regulator receiver; COG4565.
  
     0.401
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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