STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR07770.1Hypothetical protein; COG3013; Belongs to the UPF0304 family. (166 aa)    
Predicted Functional Partners:
AJR06924.1
Hypothetical protein.
  
     0.758
AJR09260.1
Hypothetical protein; COG3070.
  
     0.758
AJR07655.1
Hypothetical protein; COG0583; Belongs to the UPF0253 family.
  
     0.756
AJR05923.1
Hypothetical protein; COG3140; Belongs to the UPF0181 family.
  
     0.755
matP
Hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.753
AJR09802.1
Putative SerB-cotransposed membrane protein precursor; COG3726.
  
     0.747
AJR07892.1
Primosomal replication protein N``; COG3923.
  
     0.743
AJR06786.1
Hypothetical protein; COG3061.
  
     0.741
AJR08922.1
dsDNA-mimic protein; COG3099; Belongs to the UPF0263 family.
  
     0.737
AJR09360.1
Hypothetical protein.
  
     0.735
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.