STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR07815.1Hypothetical protein. (510 aa)    
Predicted Functional Partners:
AJR07883.1
Hypothetical protein.
  
     0.602
AJR09117.1
Hypothetical protein.
  
     0.594
AJR06686.1
Hypothetical protein; COG3203.
  
     0.529
AJR08556.1
Hypothetical protein; COG0454.
  
     0.529
AJR07816.1
Putative formate transporter 1; COG2524.
       0.527
AJR06773.1
Hypothetical protein; COG3209.
  
     0.511
AJR05344.1
Hypothetical protein.
  
     0.466
AJR05126.1
Hypothetical protein; COG4317.
  
     0.464
AJR09136.1
Hypothetical protein.
  
     0.415
AJR08986.1
Maltoporin; COG4580.
  
     0.403
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.