STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08308.1Putative glycosyl transferase; COG1215. (621 aa)    
Predicted Functional Partners:
AJR08307.1
Putative cellulase.
 
  
 0.976
AJR08309.1
Hypothetical protein.
 
    0.953
AJR08310.1
Putative lipoprotein.
 
    0.934
AJR08311.1
Putative lipoprotein; COG3459.
 
    0.926
AJR09435.1
Putative glucose-1-phosphate uridylyltransferase; COG1210.
  
 
 0.922
AJR09493.1
Putative UTP-glucose-1-phosphateuridylyltransferase, galU; COG1210.
  
 
 0.922
AJR07210.1
Putative nucleotide sugar epimerase; COG0451.
  
 0.821
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
 
 0.812
glgC-2
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
 
 0.812
AJR08306.1
Putative glycoside hydrolase family protein; COG3250; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.777
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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