STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08361.1Cytochrome bd-type quinol oxidase, subunit 2; COG1294. (332 aa)    
Predicted Functional Partners:
AJR08360.1
Putative quinol oxidase subunit I transmembrane protein; COG1271.
 
 0.999
AJR08002.1
Putative cytochrome d ubiquinol oxidase, subunit I; COG1271.
 
 
 0.991
AJR08003.1
Putative cytochrome d ubiquinol oxidase, subunit II; COG1294.
  
  
 
0.921
AJR09313.1
Cysteine/glutathione ABC transporter membrane/ATP-binding component; COG4988.
 
  
 0.904
AJR09314.1
Cysteine/glutathione ABC transporter membrane/ATP-binding component; COG4987.
 
  
 0.893
AJR08004.1
Cyd operon protein YbgTEB3; COG4890.
  
 
 0.862
AJR05195.1
Hypothetical protein; COG4619.
  
  
 0.831
AJR07932.1
Succinate dehydrogenase cytochrome b556 large membrane subunit; COG2009.
     
 0.601
AJR06838.1
Fumarate reductase iron-sulfur subunit; COG0479; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
 0.566
AJR07935.1
Succinate dehydrogenase iron-sulfur subunit; COG0479.
     
 0.566
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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