STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08519.1Oligopeptide ABC transporter periplasmic oligopeptide-binding protein; COG4166. (538 aa)    
Predicted Functional Partners:
AJR08086.1
Oligopeptide transporter permease; COG0601.
 
 0.987
AJR08087.1
Putative oligopeptide ABC transporter; COG1173.
 
 0.984
AJR08088.1
Oligopeptide transporter ATP-binding component; COG0444; Belongs to the ABC transporter superfamily.
 
 
 0.982
AJR08089.1
Putative oligopeptide ABC transporter,ATP-binding protein; COG4608; Belongs to the ABC transporter superfamily.
 
 
 0.982
AJR05963.1
Periplasmic murein peptide-binding protein; COG4166.
  
  
 
0.908
AJR08085.1
Putative oligopeptide ABC transporter,periplasmic oligopeptide-binding protein; COG4166.
  
  
 
0.903
AJR07668.1
ABC-type oligopeptide transport system, ATPase component; COG4608.
 
  
 0.749
AJR07667.1
Oligopeptide ABC transporter, ATP-binding protein; COG0444; Belongs to the ABC transporter superfamily.
 
  
 0.727
AJR09326.1
Putative peptide ABC transporter, permease protein; COG4171.
 
   
 0.724
AJR09325.1
Putative peptide ABC transporter, permease protein; COG4168.
 
   
 0.695
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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