STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08755.1Putative transcription regulator protein; COG0583; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
AJR05381.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.759
AJR05348.1
Putative glycine cleavage operon activator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.748
AJR06591.1
Putative LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.747
AJR08477.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.744
AJR05275.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.739
AJR05835.1
Putative transcriptional regulator, LysR family; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.734
AJR07362.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.725
AJR05148.1
LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.719
AJR05857.1
Hypothetical protein; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.719
AJR05478.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.711
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.