STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08787.1LysR family transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
AJR05673.1
Putative LysR-like regular protein; COG0583.
  
     0.754
AJR08788.1
Hypothetical protein.
       0.650
AJR08791.1
Hypothetical protein.
       0.650
AJR08792.1
Hypothetical protein; COG1721.
  
    0.636
AJR08789.1
Hypothetical protein; COG2304.
       0.623
AJR08793.1
MoxR-related protein; COG0714.
  
    0.618
AJR08790.1
Hypothetical protein; COG2304.
       0.603
AJR08794.1
Hypothetical protein; COG0457.
       0.481
AJR05343.1
Putative transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.460
AJR05834.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.420
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.