STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08851.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
AJR08852.1
Putative DnaK-related protein (molecular chaperone); COG0443; Belongs to the heat shock protein 70 family.
 
     0.952
AJR08853.1
Putative DnaK-related protein; COG0443.
 
     0.887
AJR05723.1
Hypothetical protein; COG1966.
  
     0.538
AJR08850.1
Hypothetical protein; COG1403.
 
     0.481
AJR05591.1
Hypothetical protein; COG0665,COG4121.
  
     0.454
AJR09021.1
Hypothetical protein; COG1858.
  
     0.449
AJR06091.1
Hypothetical protein; COG3011.
  
     0.402
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.