STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08935.1Putative trimethylamine-N-oxide reductase 1 precursor; COG0243; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (843 aa)    
Predicted Functional Partners:
torD
Chaperone protein TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.
 
 0.992
AJR08934.1
Putative trimethylamine N-oxide reductase,cytochrome c-type subunit; COG3005; Belongs to the TorC/TorY family.
 
 0.985
AJR08166.1
Putative cytochrome c-type protein TorC; COG3005; Belongs to the TorC/TorY family.
 
 0.966
AJR08997.1
Cytochrome c-type protein TorC; COG3005; Belongs to the TorC/TorY family.
 
 0.966
AJR05545.1
trimethylamine-N-oxide reductase; COG0243; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.915
AJR08998.1
Putative trimethylamine-N-oxide reductase; COG0243; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.903
AJR08167.1
Putative trimethylamine-N-oxide reductase; COG0243; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.902
AJR06475.1
Quinol dehydrogenase periplasmic component; COG1145.
 
 
 0.865
AJR06142.1
Oxidoreductase, Fe-S subunit; COG0437.
 
 
 0.840
AJR08770.1
Putative anaerobic reductase chain B (DMSO reductase iron-sulfur subunit); COG0437.
 
 
 0.833
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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