STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR08939.1Microcompartments protein; COG4577. (182 aa)    
Predicted Functional Partners:
AJR08948.1
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; COG4576.
 
 
 
 0.986
AJR08949.1
Microcompartments protein; COG4577.
 
 
 
 0.977
AJR08950.1
Microcompartments protein; COG4577.
 
 
 
 0.976
AJR08940.1
Respiratory-chain NADH dehydrogenase domain-containing protein; COG4656.
 
  
 0.946
AJR08941.1
Microcompartments protein; COG4816.
 
  
 0.945
AJR08946.1
Ethanolamine utilization protein EutJ family protein; COG4820.
 
  
 0.937
AJR08947.1
Aldehyde dehydrogenase; COG1012,COG1454.
 
  
 0.936
AJR08944.1
Reactivating factor for ethanolamine ammonia lyase; COG4819.
 
  
 0.907
AJR08955.1
Microcompartments protein; COG4810.
 
  
 0.904
AJR08953.1
Putative ethanolamine utilization EutQ family protein; COG4766.
 
  
 0.886
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.