STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR09168.1Hypothetical protein; COG0697. (279 aa)    
Predicted Functional Partners:
AJR09812.1
Putative DNA polymerase III, psi subunit; COG3050.
  
    0.744
AJR06924.1
Hypothetical protein.
  
     0.591
alaE
Putative inner membrane protein; Exports L-alanine; Belongs to the AlaE exporter family.
  
   
 0.544
AJR09164.1
Hypothetical protein; COG3683.
 
     0.492
AJR09163.1
Putative nickel transporter; COG2215; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.476
AJR07127.1
Universal stress protein UspB.
  
     0.465
AJR05407.1
Hypothetical protein; COG2357.
  
     0.460
AJR09167.1
PTS system glucose-specific EIICBA component; COG1263,COG1264.
       0.454
AJR08273.1
C4-dicarboxylate transporter DcuC; COG3069.
  
     0.452
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.452
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.