STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR09498.1Putative glycosyl transferase family protein; COG0438. (346 aa)    
Predicted Functional Partners:
AJR09502.1
Putative glycosyl transferase family 2; COG0463,COG1887.
 
  
 0.852
AJR09497.1
Putative polysaccharide biosynthesis protein; COG2244.
  
  
 0.831
AJR09503.1
UDP-N-acetyl-D-mannosamine dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.822
AJR09500.1
Hypothetical protein.
 
    0.820
AJR09496.1
Putative glycosyl transferase family protein; COG0463,COG1887.
 
  
 0.813
AJR09050.1
Putative sugar transferase domain-containing protein; COG2148.
 
  
 0.790
AJR09501.1
Hypothetical protein; COG0778.
  
    0.782
AJR09499.1
Hypothetical protein.
       0.773
AJR09504.1
UDP-N-acetylglucosamine 2-epimerase; COG0381; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.740
AJR09505.1
Putative tyrosine-protein kinase Wzc; COG0489,COG3206.
 
  
 0.694
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.