STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR09833.1ompL_phopr porin-like protein L precursor; COG3203. (326 aa)    
Predicted Functional Partners:
AJR09834.1
ompL_phopr porin-like protein L precursor; COG3203.
 
  
 
0.938
crl
DNA-binding transcriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.
  
     0.762
AJR08605.1
Hypothetical protein; COG2926; Belongs to the UPF0265 family.
  
     0.745
AJR09644.1
Fermentation/respiration switch protein; COG1073; Belongs to the UPF0255 family.
  
     0.744
AJR05865.1
Hypothetical protein; COG2425.
  
     0.737
AJR07523.1
Hypothetical protein; COG1117.
  
     0.737
zapB
Hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
     0.727
AJR06982.1
Adenylate cyclase; COG3072; Belongs to the adenylyl cyclase class-1 family.
  
     0.718
AJR07621.1
Hypothetical protein; COG0457.
  
 
   0.712
AJR09360.1
Hypothetical protein.
  
     0.694
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.