STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR09986.1Putative cation/multidrug efflux pump; COG0841; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1036 aa)    
Predicted Functional Partners:
AJR09987.1
Hypothetical protein; COG0845.
 
   
 0.951
AJR09988.1
Putative transcriptional regulator; COG1309.
 
     0.817
AJR05174.1
Putative acriflavin resistance periplasmic protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.698
AJR05742.1
RND family efflux transporter MFP subunit; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.680
AJR05238.1
Putative RND efflux membrane fusion protein precursor; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.665
AJR08363.1
Hypothetical protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.617
AJR06749.1
Putative multidrug resistance protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.614
AJR05433.1
Efflux protein, putative; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.603
AJR08326.1
Putative AcrA/AcrE family protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.555
AJR08491.1
Hypothetical protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.554
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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