STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR09995.1Thiamine transporter membrane protein; COG0555,COG1178. (521 aa)    
Predicted Functional Partners:
AJR09994.1
Thiamine transporter substrate binding subunit; COG4143.
 
 
 0.993
thiQ
Putative thiamine ABC transporter; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
 
 
 0.987
AJR08979.1
Putative iron(III) ABC transporter, periplasmic iron-compound-binding protein; COG1840.
 
  
 0.747
AJR08545.1
ABC-type Fe3+ transport system, periplasmic component; COG1840.
 
  
 0.722
AJR07769.1
Phosphoglycerate transport regulatory protein PgtC; COG1840.
 
  
 0.677
AJR07464.1
Putative ABC transporter, periplasmic iron-compound-binding protein; COG1840.
  
  
 0.635
btuF
Hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
   
  
 0.491
AJR08544.1
ABC-type spermidine/putrescine transport system, ATPase component; COG3842; Belongs to the ABC transporter superfamily.
 
  
 0.435
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
  
 0.417
fbpC
Ferric transporter ATP-binding subunit; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
  
 0.415
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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