STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR10027.1Hypothetical protein; COG2105. (121 aa)    
Predicted Functional Partners:
AJR10029.1
Hypothetical protein; COG0729.
 
   
 0.835
AJR10028.1
Hypothetical protein; COG2911.
 
     0.821
msrA-2
Putative peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.556
AJR06437.1
Putative calcium-binding EF-hand-containing protein.
  
     0.509
AJR07892.1
Primosomal replication protein N``; COG3923.
  
     0.484
AJR07127.1
Universal stress protein UspB.
  
     0.412
AJR09511.1
Hypothetical protein.
  
     0.407
AJR06786.1
Hypothetical protein; COG3061.
  
     0.404
AJR08044.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Photobacterium gaetbulicola
NCBI taxonomy Id: 658445
Other names: P. gaetbulicola Gung47, Photobacterium gaetbulicola Gung47, Photobacterium sp. Gung47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.