STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAL-glutaminase; Belongs to the glutaminase family. (302 aa)    
Predicted Functional Partners:
SFO73798.1
Glutamate synthase (NADPH) large subunit.
     
 0.867
SFO87615.1
Glutamate or tyrosine decarboxylase.
  
 
 0.839
SFP57679.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.744
SFP16286.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
     
 0.739
SFP10505.1
L-asparaginase.
 
  
 0.737
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.737
SFO73789.1
Glutamate synthase (NADPH) small subunit.
     
 0.723
SFO81744.1
Glutamate dehydrogenase.
     
 0.721
SFP01431.1
Aminomethyltransferase; Belongs to the GcvT family.
    
  0.695
SFP01203.1
Amidophosphoribosyltransferase.
     
 0.686
Your Current Organism:
Pseudomonas composti
NCBI taxonomy Id: 658457
Other names: CCUG 59231, CECT 7516, P. composti, Pseudomonas composti Gibello et al. 2011, Pseudomonas sp. C2(2009), Pseudomonas sp. CECT C2-B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.