STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP18222.1Tripartite-type tricarboxylate transporter, receptor component TctC. (325 aa)    
Predicted Functional Partners:
SFP18197.1
Putative tricarboxylic transport membrane protein.
 
 0.959
SFP49747.1
Putative tricarboxylic transport membrane protein.
 
 0.905
SFP12784.1
TctA family transporter.
 
 0.904
SFP17171.1
Putative tricarboxylic transport membrane protein.
 
 0.904
SFP37803.1
Putative tricarboxylic transport membrane protein.
 
 0.904
SFP63453.1
Putative tricarboxylic transport membrane protein.
 
 0.904
SFP18212.1
Tripartite tricarboxylate transporter TctB family protein.
  
 
 0.837
SFP17143.1
Putative tricarboxylic transport membrane protein.
  
     0.760
SFP37883.1
Putative tricarboxylic transport membrane protein.
  
     0.755
SFP17153.1
Putative tricarboxylic transport membrane protein.
 
 
 0.724
Your Current Organism:
Pseudomonas composti
NCBI taxonomy Id: 658457
Other names: CCUG 59231, CECT 7516, P. composti, Pseudomonas composti Gibello et al. 2011, Pseudomonas sp. C2(2009), Pseudomonas sp. CECT C2-B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.