Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO75170.1 | SFO87472.1 | SAMN05216601_101706 | SAMN05216601_10344 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.774 |
SFO75170.1 | SFO88345.1 | SAMN05216601_101706 | SAMN05216601_10399 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.956 |
SFO75170.1 | SFP01807.1 | SAMN05216601_101706 | SAMN05216601_104321 | 3-hydroxyacyl-CoA dehydrogenase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.856 |
SFO75170.1 | SFP02238.1 | SAMN05216601_101706 | SAMN05216601_104344 | 3-hydroxyacyl-CoA dehydrogenase. | Enoyl-CoA hydratase/carnithine racemase. | 0.943 |
SFO75170.1 | SFP34126.1 | SAMN05216601_101706 | SAMN05216601_109130 | 3-hydroxyacyl-CoA dehydrogenase. | isohexenylglutaconyl-CoA hydratase. | 0.816 |
SFO75170.1 | SFP39174.1 | SAMN05216601_101706 | SAMN05216601_110163 | 3-hydroxyacyl-CoA dehydrogenase. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.978 |
SFO75170.1 | SFP45646.1 | SAMN05216601_101706 | SAMN05216601_1126 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.836 |
SFO75170.1 | fadA | SAMN05216601_101706 | SAMN05216601_11382 | 3-hydroxyacyl-CoA dehydrogenase. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.974 |
SFO75170.1 | fadB | SAMN05216601_101706 | SAMN05216601_11383 | 3-hydroxyacyl-CoA dehydrogenase. | Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.791 |
SFO75170.1 | lcdH | SAMN05216601_101706 | SAMN05216601_101608 | 3-hydroxyacyl-CoA dehydrogenase. | Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | 0.713 |
SFO87472.1 | SFO75170.1 | SAMN05216601_10344 | SAMN05216601_101706 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.774 |
SFO87472.1 | SFO88345.1 | SAMN05216601_10344 | SAMN05216601_10399 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.781 |
SFO87472.1 | SFP01807.1 | SAMN05216601_10344 | SAMN05216601_104321 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.976 |
SFO87472.1 | SFP02238.1 | SAMN05216601_10344 | SAMN05216601_104344 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Enoyl-CoA hydratase/carnithine racemase. | 0.780 |
SFO87472.1 | SFP34126.1 | SAMN05216601_10344 | SAMN05216601_109130 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | isohexenylglutaconyl-CoA hydratase. | 0.641 |
SFO87472.1 | SFP39174.1 | SAMN05216601_10344 | SAMN05216601_110163 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.661 |
SFO87472.1 | SFP45646.1 | SAMN05216601_10344 | SAMN05216601_1126 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | enoyl-CoA hydratase. | 0.810 |
SFO87472.1 | fadA | SAMN05216601_10344 | SAMN05216601_11382 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.998 |
SFO87472.1 | fadB | SAMN05216601_10344 | SAMN05216601_11383 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.926 |
SFO87472.1 | lcdH | SAMN05216601_10344 | SAMN05216601_101608 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | 0.739 |
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