STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4K40_2655Unannotated protein. (318 aa)    
Predicted Functional Partners:
C4K40_2656
Unannotated protein.
 
 0.985
C4K40_2653
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.909
C4K40_3586
Unannotated protein.
 
 
 0.898
C4K40_2657
Unannotated protein.
 
 
 0.891
purA
Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.872
C4K40_4837
Unannotated protein.
 
 
 0.870
C4K40_5771
Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.846
C4K40_1037
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.810
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.807
rbsD
Unannotated protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.750
Your Current Organism:
Pseudomonas sp. CMR5c
NCBI taxonomy Id: 658630
Other names: P. sp. CMR5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.