STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4K40_3546Unannotated protein; Belongs to the aconitase/IPM isomerase family. (874 aa)    
Predicted Functional Partners:
C4K40_4054
Unannotated protein.
  
 
 0.980
C4K40_1756
Unannotated protein; Belongs to the citrate synthase family.
  
 
 0.968
sucC
Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.966
C4K40_4055
Unannotated protein; Belongs to the monomeric-type IDH family.
 
 
 0.931
C4K40_1925
Unannotated protein; Belongs to the citrate synthase family.
  
 
 0.927
C4K40_2012
Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
    
 0.884
C4K40_1761
Unannotated protein.
   
  
 0.880
C4K40_4971
Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
 
  
 0.877
C4K40_1928
Unannotated protein.
     
 0.867
C4K40_4063
Unannotated protein.
     
 0.863
Your Current Organism:
Pseudomonas sp. CMR5c
NCBI taxonomy Id: 658630
Other names: P. sp. CMR5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.