STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4K40_2316Unannotated protein. (426 aa)    
Predicted Functional Partners:
C4K40_5869
Unannotated protein; Belongs to the GcvT family.
  
 0.986
C4K40_2314
Unannotated protein; Belongs to the glutamine synthetase family.
 
 
 0.903
C4K40_6073
Unannotated protein; Belongs to the glutamine synthetase family.
 
 
 0.824
C4K40_2933
Unannotated protein; Belongs to the glutamine synthetase family.
 
 
 0.823
C4K40_2455
Unannotated protein; Belongs to the glutamine synthetase family.
 
 
 0.812
C4K40_0462
Unannotated protein.
  
 
 0.811
C4K40_4698
Unannotated protein; Belongs to the glutamine synthetase family.
 
 
  0.806
C4K40_6075
Unannotated protein; Belongs to the glutamine synthetase family.
 
 
 0.802
C4K40_2315
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
 
 
  0.772
C4K40_5870
Unannotated protein.
  
 0.754
Your Current Organism:
Pseudomonas sp. CMR5c
NCBI taxonomy Id: 658630
Other names: P. sp. CMR5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.