STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4K40_0413Unannotated protein. (283 aa)    
Predicted Functional Partners:
C4K40_0414
Unannotated protein.
 0.998
C4K40_0412
Unannotated protein.
 
 0.998
C4K40_1753
Unannotated protein.
 
 0.996
C4K40_3572
Unannotated protein.
 
 0.995
C4K40_5907
Unannotated protein.
 0.991
C4K40_2624
Unannotated protein.
 
 
 0.983
C4K40_0032
Unannotated protein.
 
 0.969
C4K40_5894
Unannotated protein.
 
 0.968
C4K40_2623
Unannotated protein.
 
0.960
C4K40_5905
Unannotated protein.
 
 0.958
Your Current Organism:
Pseudomonas sp. CMR5c
NCBI taxonomy Id: 658630
Other names: P. sp. CMR5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.